Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.
Identifieur interne : 000090 ( Main/Exploration ); précédent : 000089; suivant : 000091Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.
Auteurs : V. Jorge [France] ; A. Dowkiw ; P. Faivre-Rampant ; C. BastienSource :
- The New phytologist [ 0028-646X ] ; 2005.
Descripteurs français
- KwdFr :
- Basidiomycota (physiologie), Cartographie chromosomique (MeSH), Chromosomes de plante (MeSH), Croisements génétiques (MeSH), Génotype (MeSH), Immunité innée (génétique), Locus de caractère quantitatif (génétique), Maladies des plantes (génétique), Marqueurs génétiques (génétique), Populus (génétique), Populus (microbiologie), Variation génétique (physiologie).
- MESH :
- génétique : Immunité innée, Locus de caractère quantitatif, Maladies des plantes, Marqueurs génétiques, Populus.
- microbiologie : Populus.
- physiologie : Basidiomycota, Variation génétique.
- Cartographie chromosomique, Chromosomes de plante, Croisements génétiques, Génotype.
English descriptors
- KwdEn :
- Basidiomycota (physiology), Chromosome Mapping (MeSH), Chromosomes, Plant (MeSH), Crosses, Genetic (MeSH), Genetic Markers (genetics), Genetic Variation (physiology), Genotype (MeSH), Immunity, Innate (genetics), Plant Diseases (genetics), Populus (genetics), Populus (microbiology), Quantitative Trait Loci (genetics).
- MESH :
- chemical , genetics : Genetic Markers.
- genetics : Immunity, Innate, Plant Diseases, Populus, Quantitative Trait Loci.
- microbiology : Populus.
- physiology : Basidiomycota, Genetic Variation.
- Chromosome Mapping, Chromosomes, Plant, Crosses, Genetic, Genotype.
Abstract
In order to elucidate the genetic control of resistance to Melampsora larici-populina leaf rust in hybrid poplars, a Populus deltoides x P. trichocarpa F(1) progeny was analysed for qualitative and quantitative rust resistances. This progeny was evaluated for three components of quantitative resistance (latent period, uredinia number and uredinia size) to seven M. larici-populina strains in controlled conditions, and for one component of field susceptibility (rust colonization on the most infected leaf). One qualitative resistance locus inherited from P. deltoides, R(1), was localized on the genetic map. It segregates 1 : 1 in the F(1) progeny and is effective against four of the studied strains. QTL analysis was performed separately on R(1) and r(1) genotype subsets. An additional detection was conducted on the entire F(1) progeny for the three strains able to overcome R(1) and for MAX2. A total of nine QTLs were detected. Two had large, broad-spectrum effects. One (R(US)) is inherited from the P. trichocarpa parent; the other is inherited from P. deltoides and colocalized with R(1). Seven QTLs had only limited and specific effects. Significant interaction effects were detected mainly between the two major QTLs. Implications of these results for durable resistance breeding strategies, and possible benefits from the Populus genome sequence, are discussed.
DOI: 10.1111/j.1469-8137.2005.01424.x
PubMed: 15948835
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.</title><author><name sortKey="Jorge, V" sort="Jorge, V" uniqKey="Jorge V" first="V" last="Jorge">V. Jorge</name><affiliation wicri:level="3"><nlm:affiliation>Unité Amélioration, Génétique et Physiologie Forestières, Institut National de la Recherche Agronomique, F-45166 Olivet Cedex, France. jorge@orleans.inra.fr</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité Amélioration, Génétique et Physiologie Forestières, Institut National de la Recherche Agronomique, F-45166 Olivet Cedex</wicri:regionArea><placeName><region type="region" nuts="2">Centre-Val de Loire</region><region type="old region" nuts="2">Région Centre</region><settlement type="city">Olivet</settlement></placeName></affiliation></author><author><name sortKey="Dowkiw, A" sort="Dowkiw, A" uniqKey="Dowkiw A" first="A" last="Dowkiw">A. Dowkiw</name></author><author><name sortKey="Faivre Rampant, P" sort="Faivre Rampant, P" uniqKey="Faivre Rampant P" first="P" last="Faivre-Rampant">P. Faivre-Rampant</name></author><author><name sortKey="Bastien, C" sort="Bastien, C" uniqKey="Bastien C" first="C" last="Bastien">C. Bastien</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2005">2005</date><idno type="RBID">pubmed:15948835</idno><idno type="pmid">15948835</idno><idno type="doi">10.1111/j.1469-8137.2005.01424.x</idno><idno type="wicri:Area/Main/Corpus">000096</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000096</idno><idno type="wicri:Area/Main/Curation">000096</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000096</idno><idno type="wicri:Area/Main/Exploration">000096</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.</title><author><name sortKey="Jorge, V" sort="Jorge, V" uniqKey="Jorge V" first="V" last="Jorge">V. Jorge</name><affiliation wicri:level="3"><nlm:affiliation>Unité Amélioration, Génétique et Physiologie Forestières, Institut National de la Recherche Agronomique, F-45166 Olivet Cedex, France. jorge@orleans.inra.fr</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité Amélioration, Génétique et Physiologie Forestières, Institut National de la Recherche Agronomique, F-45166 Olivet Cedex</wicri:regionArea><placeName><region type="region" nuts="2">Centre-Val de Loire</region><region type="old region" nuts="2">Région Centre</region><settlement type="city">Olivet</settlement></placeName></affiliation></author><author><name sortKey="Dowkiw, A" sort="Dowkiw, A" uniqKey="Dowkiw A" first="A" last="Dowkiw">A. Dowkiw</name></author><author><name sortKey="Faivre Rampant, P" sort="Faivre Rampant, P" uniqKey="Faivre Rampant P" first="P" last="Faivre-Rampant">P. Faivre-Rampant</name></author><author><name sortKey="Bastien, C" sort="Bastien, C" uniqKey="Bastien C" first="C" last="Bastien">C. Bastien</name></author></analytic><series><title level="j">The New phytologist</title><idno type="ISSN">0028-646X</idno><imprint><date when="2005" type="published">2005</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basidiomycota (physiology)</term><term>Chromosome Mapping (MeSH)</term><term>Chromosomes, Plant (MeSH)</term><term>Crosses, Genetic (MeSH)</term><term>Genetic Markers (genetics)</term><term>Genetic Variation (physiology)</term><term>Genotype (MeSH)</term><term>Immunity, Innate (genetics)</term><term>Plant Diseases (genetics)</term><term>Populus (genetics)</term><term>Populus (microbiology)</term><term>Quantitative Trait Loci (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Basidiomycota (physiologie)</term><term>Cartographie chromosomique (MeSH)</term><term>Chromosomes de plante (MeSH)</term><term>Croisements génétiques (MeSH)</term><term>Génotype (MeSH)</term><term>Immunité innée (génétique)</term><term>Locus de caractère quantitatif (génétique)</term><term>Maladies des plantes (génétique)</term><term>Marqueurs génétiques (génétique)</term><term>Populus (génétique)</term><term>Populus (microbiologie)</term><term>Variation génétique (physiologie)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Genetic Markers</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Immunity, Innate</term><term>Plant Diseases</term><term>Populus</term><term>Quantitative Trait Loci</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Immunité innée</term><term>Locus de caractère quantitatif</term><term>Maladies des plantes</term><term>Marqueurs génétiques</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Basidiomycota</term><term>Variation génétique</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Basidiomycota</term><term>Genetic Variation</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Chromosome Mapping</term><term>Chromosomes, Plant</term><term>Crosses, Genetic</term><term>Genotype</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Cartographie chromosomique</term><term>Chromosomes de plante</term><term>Croisements génétiques</term><term>Génotype</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In order to elucidate the genetic control of resistance to Melampsora larici-populina leaf rust in hybrid poplars, a Populus deltoides x P. trichocarpa F(1) progeny was analysed for qualitative and quantitative rust resistances. This progeny was evaluated for three components of quantitative resistance (latent period, uredinia number and uredinia size) to seven M. larici-populina strains in controlled conditions, and for one component of field susceptibility (rust colonization on the most infected leaf). One qualitative resistance locus inherited from P. deltoides, R(1), was localized on the genetic map. It segregates 1 : 1 in the F(1) progeny and is effective against four of the studied strains. QTL analysis was performed separately on R(1) and r(1) genotype subsets. An additional detection was conducted on the entire F(1) progeny for the three strains able to overcome R(1) and for MAX2. A total of nine QTLs were detected. Two had large, broad-spectrum effects. One (R(US)) is inherited from the P. trichocarpa parent; the other is inherited from P. deltoides and colocalized with R(1). Seven QTLs had only limited and specific effects. Significant interaction effects were detected mainly between the two major QTLs. Implications of these results for durable resistance breeding strategies, and possible benefits from the Populus genome sequence, are discussed.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">15948835</PMID><DateCompleted><Year>2005</Year><Month>08</Month><Day>16</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0028-646X</ISSN><JournalIssue CitedMedium="Print"><Volume>167</Volume><Issue>1</Issue><PubDate><Year>2005</Year><Month>Jul</Month></PubDate></JournalIssue><Title>The New phytologist</Title><ISOAbbreviation>New Phytol</ISOAbbreviation></Journal><ArticleTitle>Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.</ArticleTitle><Pagination><MedlinePgn>113-27</MedlinePgn></Pagination><Abstract><AbstractText>In order to elucidate the genetic control of resistance to Melampsora larici-populina leaf rust in hybrid poplars, a Populus deltoides x P. trichocarpa F(1) progeny was analysed for qualitative and quantitative rust resistances. This progeny was evaluated for three components of quantitative resistance (latent period, uredinia number and uredinia size) to seven M. larici-populina strains in controlled conditions, and for one component of field susceptibility (rust colonization on the most infected leaf). One qualitative resistance locus inherited from P. deltoides, R(1), was localized on the genetic map. It segregates 1 : 1 in the F(1) progeny and is effective against four of the studied strains. QTL analysis was performed separately on R(1) and r(1) genotype subsets. An additional detection was conducted on the entire F(1) progeny for the three strains able to overcome R(1) and for MAX2. A total of nine QTLs were detected. Two had large, broad-spectrum effects. One (R(US)) is inherited from the P. trichocarpa parent; the other is inherited from P. deltoides and colocalized with R(1). Seven QTLs had only limited and specific effects. Significant interaction effects were detected mainly between the two major QTLs. Implications of these results for durable resistance breeding strategies, and possible benefits from the Populus genome sequence, are discussed.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Jorge</LastName><ForeName>V</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Unité Amélioration, Génétique et Physiologie Forestières, Institut National de la Recherche Agronomique, F-45166 Olivet Cedex, France. jorge@orleans.inra.fr</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dowkiw</LastName><ForeName>A</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Faivre-Rampant</LastName><ForeName>P</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Bastien</LastName><ForeName>C</ForeName><Initials>C</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>New Phytol</MedlineTA><NlmUniqueID>9882884</NlmUniqueID><ISSNLinking>0028-646X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005819">Genetic Markers</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002874" MajorTopicYN="N">Chromosome Mapping</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032461" MajorTopicYN="N">Chromosomes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003433" MajorTopicYN="N">Crosses, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005819" MajorTopicYN="N">Genetic Markers</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014644" MajorTopicYN="N">Genetic Variation</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007113" MajorTopicYN="N">Immunity, Innate</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D040641" MajorTopicYN="N">Quantitative Trait Loci</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2005</Year><Month>6</Month><Day>14</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2005</Year><Month>8</Month><Day>17</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2005</Year><Month>6</Month><Day>14</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">15948835</ArticleId><ArticleId IdType="pii">NPH1424</ArticleId><ArticleId IdType="doi">10.1111/j.1469-8137.2005.01424.x</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>France</li></country><region><li>Centre-Val de Loire</li><li>Région Centre</li></region><settlement><li>Olivet</li></settlement></list><tree><noCountry><name sortKey="Bastien, C" sort="Bastien, C" uniqKey="Bastien C" first="C" last="Bastien">C. Bastien</name><name sortKey="Dowkiw, A" sort="Dowkiw, A" uniqKey="Dowkiw A" first="A" last="Dowkiw">A. Dowkiw</name><name sortKey="Faivre Rampant, P" sort="Faivre Rampant, P" uniqKey="Faivre Rampant P" first="P" last="Faivre-Rampant">P. Faivre-Rampant</name></noCountry><country name="France"><region name="Centre-Val de Loire"><name sortKey="Jorge, V" sort="Jorge, V" uniqKey="Jorge V" first="V" last="Jorge">V. Jorge</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarRustV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000090 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000090 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarRustV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:15948835
|texte= Genetic architecture of qualitative and quantitative Melampsora larici-populina leaf rust resistance in hybrid poplar: genetic mapping and QTL detection.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:15948835" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarRustV1
| This area was generated with Dilib version V0.6.37. |  |